Items where Author is "Dang, Thanh Hai"

Article

Pham, Thi Quynh Trang and Bui, Manh Thang and Dang, Thanh Hai (2020) Single Concatenated Input is Better than Indenpendent Multiple-input for CNNs to Predict Chemical-induced Disease Relation from Literature. VNU Journal of Science: Computer Science and Communication Engineering, 36 (1). pp. 11-16. ISSN 2588-1086

Vu, Thi Ngoc Anh and Nguyen, Trong Dong and Nguyen, Vu Hoang Vuong and Dang, Thanh Hai and Do, Duc Dong (2019) Adaptive Large Neighborhood Search Enhances Global Protein-Protein Network Alignment. VNU Journal of Computer Science and Communication Engineering . ISSN 0866-8612 (In Press)

Dang, Thanh Hai and Le, Hoang Quynh and Nguyen, Minh Trang and Vu, Tien Sinh (2018) D3NER: Biomedical named entity recognition using CRF-biLSTM improved with fine-tuned embeddings of various linguistic information. Bioinformatics . ISSN 1460-2059 (In Press)

Vu Thi Ngoc, Anh and Thai Dinh, Phuc and Nguyen, Hoang Duc and Dang, Thanh Hai and Do Duc, Dong (2017) Ant colony optimization based founder sequence reconstruction. VNU Journal of Computer Science and Communication Engineering . ISSN 0866-8612 (In Press)

Pham, The Hai/V and Nguyen, Hai Nam and Doan, Viet Nga and Dang, Thanh Hai and Dieguez-Santana, Karel and Marrero-Poncee, Yovani and Castillo-Garit, Juan/A and Casanola-Martin, Gerardo/M and Le, Thi Thu Huong (2017) Learning from Multiple Classifier Systems: Perspectives for Improving Decision Making of QSAR Models in Medicinal Chemistry. Current Topics in Medicinal Chemistry, 18 . pp. 1-20. ISSN 1873-4294

Le, Hoang Quynh and Tran, Mai Vu and Dang, Thanh Hai and Ha, Quang Thuy and Collier, Nigel (2016) Sieve-based coreference resolution enhances semi-supervised learning model for chemical-induced disease relation extraction. Database, 2016 . baw102. ISSN 1758-0463

Dang, Thanh Hai and Nguyen, Dai Thanh and Pham, Thi Minh Trang and Le, Si Quang and Phan, Thi Thu Hang and Dang, Cao Cuong and Hoang, Kim Phuc and Nguyen, Huu Duc and Do, Duc Dong and Bui, Quang Minh and Pham, Bao Son and Le, Sy Vinh (2015) Whole Genome Analysis of a Vietnamese Trio. Journal of Bioscience, 40 (1). pp. 114-123. ISSN 0250-5991

Nguyen, Dai Thanh and Pham, Thi Minh Trang and Dang, Thanh Hai and Nguyen, Ha Anh Tuan and Le, Si Quang and Bui, Quang Minh and Dao, Quang Minh and Pham, Bao Son and Le, Sy Vinh (2015) AB050. Building population-specific reference genomes: a case study of Vietnamese reference genome. Annals of translational medicine, 3 (Suppl). ISSN 2305-5839

Dang, Thanh Hai and Nguyen, Dai Thanh and Pham, Thi Minh Trang and Dang, Cao Cuong and Hoang, Kim Phuc and Pham, Bao Son and Le, Sy Vinh and Le, Si Quang and Phan, Thi Thu Hang and Do, Duc Dong (2014) Preliminary results on the whole genome analysis of a Vietnamese individual. VNU Journal of Computer Science and Communication Engineering, 30 (3). pp. 31-35. ISSN 0866-8612

Remmerie, Noor and De Vijlder, Thomas and Laukens, Kris and Dang, Thanh Hai and Lemiere, Filip and Mertens, Inge and Valkenborg, Dirk and Blust, Ronny and Witters, Erwin (2011) Next generation functional proteomics in non-model plants: a survey on techniques and applications for the analysis of protein complexes and post-translational modifications. Phytochemistry, 72 (10). pp. 1192-1218. ISSN 0031-9422

Meysman, Pieter and Dang, Thanh Hai and Laukens, Kris and De Smet, Riet and Wu, Yan and Marchal, Kathleen and Engelen, Kristof (2011) Use of structural DNA properties for the prediction of transcription-factor binding sites in Escherichia coli. Nucleic Acids Research, 39 (2). e6.

Laukens, Kris and Hollunder, Jens and Dang, Thanh Hai and De Jaeger, Geert and Kuiper, Martin and Witters, Erwin and Verschoren, Alain and Van Leemput, Koenraad (2010) Flexible network reconstruction from relational databases with Cytoscape and CytoSQL. BMC Bioinformatics, 11 (1). p. 360. ISSN 1471-2105

Van Damme, Ellen and Laukens, Kris and Dang, Thanh Hai and Van Ostade, Xaveer (2010) A manually curated network of the PML nuclear body interactome reveals an important role for PML-NBs in SUMOylation dynamics. International Journal of Biological Sciences, 6 (1). pp. 51-67. ISSN 1568-1577

Dang, Thanh Hai and Van Leemput, Koenraad and Verschoren, Alain and Laukens, Kris (2008) Prediction of kinase-specific phosphorylation sites using conditional random fields. Bioinformatics, 24 (24). pp. 2857-2864. ISSN 1460-2059

Technical Report

Dang, Thanh Hai (2019) SKIPHOS: non-kinase specific phosphorylation site prediction with random forests and amino acid skip-gram embeddings. Technical Report. VNU University of Engineering and Technology. (In Press)

Nguyen, Thanh Ngan and Nguyen, Minh Trang and Dang, Thanh Hai (2018) Disease Named Entity Normalization Using Pairwise Learning To Rank and Deep Learning. Technical Report. VNU University of Engineering and Technology.

Phan, Huy Kinh and Dang, Thanh Hai (2018) Protein structure prediction using Deep Learning. Technical Report. VNU University of Engineering and Technology.

Conference or Workshop Item

Le, Hoang Quynh and Can, Duy Cat and Vu, Tien Sinh and Dang, Thanh Hai and Pilehvar, Mohammad Taher and Collier, Nigel (2018) Large-scale Exploration of Neural Relation Classification Architectures. In: The 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium.

Le, Hoang Quynh and Can, Duy Cat and Vu, Tien Sinh and Dang, Thanh Hai and Pilehvar, Mohammad Taher and Collier, Nigel (2018) Large-scale Exploration of Neural Relation Classification Architectures. In: Conference on Empirical Methods in Natural Language Processing (EMNLP 2018), October 31 - November 4 2018, Brussels, Belgium.

Vu, Thi Ngoc Anh and Nguyen, Vu Hoang Vuong and Dang, Thanh Hai and Do, Duc Dong (2017) APP-RB: An efficient method for biological network querying based on rebuild procedure. In: 2017 4th NAFOSTED Conference on Information and Computer Science (NICS 2017), 24-25 November 2017, Hanoi, Vietnam.

Le, Hoang Quynh and Can, Duy Cat and Dang, Thanh Hai and Tran, Mai Vu and Ha, Quang Thuy and Collier, Nigel (2017) Improving Chemical-induced Disease Relation Extraction with Learned Features Based on Convolutional Neural Network. In: The 9th International Conference on Knowledge and Systems Engineering (KSE), 19-21 October 2017, Hue, Vietnam.

Le, Hoang Quynh and Tran, Mai Vu and Dang, Thanh Hai and Ha, Quang Thuy and Nigel, Collier (2016) Sieve-based coreference resolution enhances semi-supervised learning model for chemical-induced disease relations extraction. In: SW4PHD: the 2016 Scientific Workshop for PhD Students, 26 March 2016, Hanoi.

Do, Duc Dong and Tran, Ngoc Ha and Dang, Thanh Hai and Dang, Cao Cuong and Hoang, Xuan Huan (2015) An efficient algorithm for global alignment of protein-protein interaction networks. In: The 2015 International Conference Advanced Technologies for Communications (ATC), 14-16 October 2015, Ho Chi Minh city, Vietnam.

Le, Hoang Quynh and Tran, Mai Vu and Dang, Thanh Hai and Nigel, Collier (2015) The UET-CAM System in the BioCreAtIvE V CDR Task. In: 2015: the 5th BioCreative challenge evaluation workshop, 2015, Sevilla, Spain.

Le, Hoang Quynh and Tran, Mai Vu and Dang, Thanh Hai and Collier, Nigel (2015) The UET-CAM System in the BioCreAtIvE V CDR Task. In: The 5th BioCreative Challenge Evaluation, 2015, Spain.

Do, Duc Dong and Dinh, Quang Huy and Dang, Thanh Hai and Laukens, Kris and Hoang, Xuan Huan (2012) AcoSeeD: An ant colony optimization for finding optimal spaced seeds in biological sequence search. In: International Conference on Swarm Intelligence, 2012.

Dang, Thanh Hai and Engelen, Kristof and Meysman, Pieter and Marchal, Kathleen and Verschoren, Alain and Laukens, Kris (2009) Conditional Random Fields feature subset selection based on Genetic Algorithms for phosphorylation site prediction. In: The 2009 International Conference on Knowledge and Systems Engineering (KSE), 2009.

Dang, Thanh Hai and Lee, Wonjun and Ha, Quang Thuy (2008) A pageranking based method for identifying characteristic genes of a disease. In: IEEE International Conference on Networking, Sensing and Control (ICNSC), 2008.